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Supporting Information Molecular modelling, synthesis, and biological evaluations of a 3,5-disubstituted isoxazole fatty acid analogue as a

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Supporting Information

Molecular modelling, synthesis, and biological evaluations of a 3,5-disubstituted isoxazole fatty acid analogue as a PPARα -selective agonist

Henriette Arnesen

1

, Nadia Alazraq

1

, Jørn E. Tungen

2

, Helen Södling

1

, Jason

Matthews

1

, Steinar M. Paulsen

3

, Hilde Nebb

1

, Ingebrigt Sylte

4

, Trond V. Hansen

2

and Thomas Sæther

1,5

1

Department of Nutrition, Institute of Basic Medical Sciences, University of Oslo, N- 0317 Oslo, Norway

2

Department of Pharmaceutical Chemistry, School of Pharmacy, University of Oslo, N-0316 Oslo, Norway

3

MabCent-SFI, UiT – The Arctic University of Norway, N-9037 Tromsø, Norway

4

Department of Medical Biology, Faculty of Health Sciences, UiT – The Arctic University of Norway, N-9037 Tromsø, Norway

5

Department of Molecular Medicine, Institute of Basic Medical Sciences, University of

Oslo, N-0317 Oslo, Norway

(2)

-1.0 -0.5 0.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5

9.0 f1 (ppm)

-1000 0 1000 2000 3000 4000 5000 6000 7000 8000 9000 10000 11000 12000 13000 14000 15000

3.04

8.04

1.90

1.98

2.99

1.00 0.870.880.901.251.261.281.281.291.301.301.311.321.331.341.341.351.361.361.371.681.701.711.731.752.782.802.823.966.41

Fig S1.

1

H NMR spectrum of compound 6 in CDCl

3

(400 MHz)

-10 0 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200

210 f1 (ppm)

-100 0 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1800 1900 2000

14.04

22.5826.7027.3728.8328.9231.62

52.75

101.40

156.04160.71

175.85

Fig S2.

13

C NMR spectrum of compound 6 in CDCl

3

(101 MHz)

O N O

OMe

O N O

OMe

(3)

-1.0 -0.5 0.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 10.5 11.0 11.5

12.0 f1 (ppm)

-100 0 100 200 300 400 500 600 700 800 900 1000

3.12

8.36

2.05

2.00

0.95

0.92 0.860.880.901.261.281.281.301.311.331.341.361.671.701.721.751.772.792.812.846.3710.12

Fig S3.

1

H NMR spectrum of compound 7 in CDCl

3

(300 MHz)

1000 2000 3000 4000 5000 6000 7000 8000 9000 10000 11000 12000 13000 14000 15000 16000 17000 18000 19000 20000 21000 22000

14.19

22.7226.8427.4928.9629.0731.76

98.07

162.30

176.28

185.26

O N

O O

N O

(4)

0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 10.5

11.0 f1 (ppm)

0 100 200 300 400 500 600 700 800 900 1000

3.09

8.62

2.122.07

2.092.002.02

1.000.99

1.00

0.90 0.850.880.901.261.261.271.281.291.311.311.321.321.331.341.351.641.671.691.711.741.771.801.821.851.872.402.422.452.472.472.492.502.522.522.542.552.702.722.755.875.895.915.925.935.965.996.266.276.286.306.316.319.15

Fig S5.

1

H NMR spectrum of compound 9 in CDCl

3

(300 MHz)

-10 0 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200

210 f1 (ppm)

-1000 0 1000 2000 3000 4000 5000 6000 7000 8000 9000 10000 11000 12000 13000 14000 15000

14.2122.7524.2626.7927.6528.9229.0229.2031.8133.47

101.27

117.89

137.59

159.86

173.53

179.25

Fig S6.

13

C NMR spectrum of compound 9 in CDCl

3

(101 MHz)

O

N OH

O

O

N OH

O

(5)

-0.5 0.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 10.5 11.0 11.5

12.0 f1 (ppm)

-1000 0 1000 2000 3000 4000 5000 6000 7000 8000 9000 10000 11000 12000 13000

3.02

10.00

5.91

2.03

3.94

1.00

1.15 0.860.870.891.261.271.271.281.291.301.301.311.311.321.331.341.341.351.411.421.431.631.641.651.661.671.681.691.712.332.352.372.602.622.642.662.682.705.80

10.12

Fig S7.

1

H NMR spectrum of compound 1 in CDCl

3

(400 MHz)

0 1000 2000 3000 4000 5000 6000 7000 8000 9000 10000 11000 12000 13000 14000

14.1922.7324.4625.9826.8527.6328.0328.7029.0229.1931.7933.97

100.36

163.82

173.64

179.59

O N

OH O

O N

OH O

(6)

Fig S9. HRMS ESI

+

spectrum of compound 1 in CH

2

Cl

2

/MeOH (95:5)

O N

OH O

(7)

Table S1. Human SYBR green RT-qPCR primers

Name Full Name Accession Number 5' – 3' Sequence

TBP-F TATA box binding protein, transcript variant 1 NM_003194.4 TTGTACCGCAGCTGCAAAAT TBP-R TATA box binding protein, transcript variant 1 NM_003194.4 TATATTCGGCGTTTCGGGCA CPT1A-F Carnitine palmitoyltransferase 1A (liver) NM_001876.3 CAGGAGACAGAGTTCCCTGG CPT1A-R Carnitine palmitoyltransferase 1A (liver) NM_001876.3 TCTAACGTCACGAAGAACGCT PPARA-F Peroxisome proliferator-activated receptor alpha NM_001001928.2 TCGGCGAGGATAGTTCTGGA PPARA-R Peroxisome proliferator-activated receptor alpha NM_001001928.2 TGAAAGCGTGTCCGTGATGA

SCD-F Stearoyl-CoA desaturas NM_005063.4 ACACCCAGCTGTCAAAGAGA

SCD-R Stearoyl-CoA desaturase NM_005063.4 GCCAGGTTTGTAGTACCTCCTC

SREBF1-F Sterol regulatory element binding transcription factor 1 NM_001005291.2 CCGCTCCTCCATCAATGACA SREBF1-R Sterol regulatory element binding transcription factor 1 NM_001005291.2 GCTGTGTTGCAGAAAGCGAA PPARG-F Peroxisome proliferator-activated receptor gamma NM_015869.4 ACAGATCCAGTGGTTGCAGA PPARG-R Peroxisome proliferator-activated receptor gamma NM_015869.4 TCCACTTTGATTGCACTTTGGT CEBPA-F CCAAT/enhancer binding protein (C/EBP), alpha NM_001287424.1 CCCAGAGGGACCGGAGTTAT CEBPA-R CCAAT/enhancer binding protein (C/EBP), alpha NM_001287424.1 AGACGCGCACATTCACATTG ACSL1-F Acyl-CoA synthetase long-chain family member 1 NM_001286708.1 CTTCTGGTACGCCACGAGAC ACSL1-R Acyl-CoA synthetase long-chain family member 1 NM_001286708.1 GTCGCTGTCAAGTAGTGCG CD36-F CD36 molecule (thrombospondin receptor) NM_000072.3 CCTGGCTGTGTTTGGAGGTAT CD36-R CD36 molecule (thrombospondin receptor) NM_000072.3 CTTCGAGGACAACTTGCTTTT FABP4-F Fatty acid binding protein 4, adipocyte NM_001442.2 ATGGGGGTGTCCTGGTACAT FABP4-R Fatty acid binding protein 4, adipocyte NM_001442.2 TCGTGGAAGTGACGCCTTTC PLIN1-F Perilipin 1, transcript variant 1 NM_002666 GACAAGGAAGAGTCAGCCCC PLIN1-R Perilipin 1, transcript variant 1 NM_002666 GAGAGGGTGTTGGTCAGAGC ADIPOQ-F Adiponectin, C1Q and collagen domain containing NM_001177800 AAGGAGATCCAGGTCTTATTGGT ADIPOQ-R Adiponectin, C1Q and collagen domain containing NM_001177800 GTTCTCCTTTCCTGCCTTGGA ANGPTL4 -F Angiopoietin-like 4, transcript variant 1 NM_139314.2 TCCACCGACCTCCCGTTAG ANGPTL4-R Angiopoietin-like 4, transcript variant 1 NM_139314.2 GGCCACCTTGTGGAAGAGTT

Table S2. Mouse SYBR green RT-qPCR primers

Name Full Name Accession Number 5' – 3' Sequence

Tbp-F TATA box binding protein NM_013684.3 GCACAGGAGCCAAGAGTGAA

Tbp-R TATA box binding protein NM_013684.3 TAGCTGGGAAGCCCAACTTC

Cpt1a-F Carnitine palmitoyltransferase 1a, liver NM_013495.2 GGGCCATCTGTGGGAGTATG Cpt1a-R Carnitine palmitoyltransferase 1a, liver NM_013495.2 ACTGTAGCCTGGTGGGTTTG Ppara-F Peroxisome proliferator activated receptor alpha NM_011144.6 CAACAACCCGCCTTTTGTCA Ppara-R Peroxisome proliferator activated receptor alpha NM_011144.6 TCTTTGTCTTCGACGCCGTT Scd1-F Stearoyl-Coenzyme A desaturase 1 NM_009127.4 AAAGCCGAGAAGCTGGTGAT Scd1-R Stearoyl-Coenzyme A desaturase 1 NM_009127.4 TACAAAAGTCTCGCCCCAGC Srebf1-F Sterol regulatory element binding transcription factor 1 NM_011480.3 GCACACAAAAGCAAATCACTG

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